🐉
cryoDRGN
  • CryoDRGN User Guide
    • News and Release Notes
  • Installation
  • CryoDRGN EMPIAR-10076 Tutorial
  • CryoDRGN2 Ab Initio Reconstruction
  • CryoDRGN-ET Subtomogram Analysis
  • CryoDRGN Conformational Landscape Analysis
  • Making long trajectories with cryoDRGN graph_traversal
  • FAQ & Troubleshooting
  • Helpful Resources
    • ChimeraX tips
  • Deprecated Workflows
    • Handling large datasets with cryoDRGN preprocess
Powered by GitBook
On this page
  • Release Timeline
  • Software Change Log
  • Documentation Change Log
  1. CryoDRGN User Guide

News and Release Notes

a timeline of updates to cryoDRGN

PreviousCryoDRGN User GuideNextInstallation

Last updated 8 months ago

Release Timeline

  • 06/2024: released, addressing issues in backproject, write_star, and filter

  • 05/2024: released with improvements and fixes made to several features, including filtering with notebooks, FSC plots in backproject_voxel, and support for RELION 3.1 inputs in parse_pose_star

  • 04/2024: released — first non-beta release of , new command cryodrgn direct_traversal, improved testing, and cleaned-up Jupyter notebooks

  • 03/2024: released with new commands including cryodrgn_utils clean, cryodrgn_utils gen_mask, and cryodrgn_utils fsc

  • 12/2023: released with new command cryodrgn filter for interactive filtering of particles

  • 09/2023: for subtomogram analysis is now available in beta, as

  • 06/2023: documentation clean up, available here on gitbook

  • 05/2023: released with improvements and fixes to ab initio tools.

  • 01/2023: released with new ab initio reconstruction tools and more.

  • 07/2022: released with updated default architecture

  • 05/2022: released with new landscape analysis, cryodrgn_utils, and more

Software Change Log

Comprehensive notes on all releases including minor and patch versions can be found at the Github repository:

Documentation Change Log

  • May 2024:

  • June 2023:

    • new page on Making long trajectories with cryoDRGN graph_traversal

updating and expanding tutorial on using cryoDRGN v3 for

creating "Deprecated Workflows" initially populated with cryodrgn preprocess material

moving documentation to gitbook (here) — the previous documentation found at /sphinx will no longer be updated

cryodrgn version 3.3.3
cryodrgn version 3.3.2
cryodrgn version 3.3.0
cryoDRGN-ET
cryodrgn version 3.2.0-beta
cryodrgn version 3.1.0-beta
CryoDRGN-ET
cryodrgn version 3.0.0-beta
cryodrgn version 2.3.0
cryodrgn version 2.2.0
cryodrgn version 1.1.0
cryodrgn version 1.0.0
https://github.com/zhonge/cryodrgn/releases
subtomogram analysis
new page group
Notion